marco@Marco-Server:~/folding$ ./fah6 -smp -bigadv
Note: Please read the license agreement (fah6 -license). Further
use of this software requires that you have read and accepted this agreement.
32 cores detected
--- Opening Log file [February 6 21:41:45 UTC]
# Linux SMP Console Edition ###################################################
###############################################################################
Folding@Home Client Version 6.34
http://folding.stanford.edu
###############################################################################
###############################################################################
Launch directory: /home/marco/folding
Executable: ./fah6
Arguments: -smp -bigadv -smp -bigbeta
[21:41:45] - Ask before connecting: No
[21:41:45] - User name: Schmidde (Team 70335)
[21:41:45] - User ID: 3414AED219C9F399
[21:41:45] - Machine ID: 1
[21:41:45]
[21:41:46] Loaded queue successfully.
[21:41:46]
[21:41:46] + Processing work unit
[21:41:46] Core required: FahCore_a5.exe
[21:41:46] Core found.
[21:41:46] Working on queue slot 03 [February 6 21:41:46 UTC]
[21:41:46] + Working ...
[21:41:46]
[21:41:46] *------------------------------*
[21:41:46] Folding@Home Gromacs SMP Core
[21:41:46] Version 2.27 (Thu Feb 10 09:46:40 PST 2011)
[21:41:46]
[21:41:46] Preparing to commence simulation
[21:41:46] - Ensuring status. Please wait.
[21:41:55] - Looking at optimizations...
[21:41:55] - Working with standard loops on this execution.
[21:41:55] - Previous termination of core was improper.
[21:41:55] - Files status OK
[21:42:02] - Expanded 57246854 -> 71846524 (decompressed 50.4 percent)
[21:42:02] Called DecompressByteArray: compressed_data_size=57246854 data_size=71846524, decompressed_data_size=71846524 diff=0
[21:42:03] - Digital signature verified
[21:42:03]
[21:42:03] Project: 6903 (Run 5, Clone 13, Gen 69)
[21:42:03]
[21:42:03] Entering M.D.
[21:42:09] Using Gromacs checkpoints
:-) G R O M A C S (-:
Groningen Machine for Chemical Simulation
:-) VERSION 4.5.3 (-:
Written by Emile Apol, Rossen Apostolov, Herman J.C. Berendsen,
Aldert van Buuren, Pär Bjelkmar, Rudi van Drunen, Anton Feenstra,
Gerrit Groenhof, Peter Kasson, Per Larsson, Pieter Meulenhoff,
Teemu Murtola, Szilard Pall, Sander Pronk, Roland Schulz,
Michael Shirts, Alfons Sijbers, Peter Tieleman,
Berk Hess, David van der Spoel, and Erik Lindahl.
Copyright (c) 1991-2000, University of Groningen, The Netherlands.
Copyright (c) 2001-2010, The GROMACS development team at
Uppsala University & The Royal Institute of Technology, Sweden.
check out http://www.gromacs.org for more information.
:-) Gromacs (-:
[21:42:15] Mapping NT from 32 to 32
Reading file work/wudata_03.tpr, VERSION 4.5.4-dev-20110530-cc815 (single precision)
Starting 32 threads
Reading checkpoint file work/wudata_03.cpt generated: Mon Feb 6 22:27:37 2012
Making 2D domain decomposition 8 x 4 x 1
starting mdrun 'Overlay'
17500000 steps, 70000.0 ps (continuing from step 17001225, 68004.9 ps).
[21:42:26] Resuming from checkpoint
[21:43:31] Verified work/wudata_03.log
[21:43:31] Verified work/wudata_03.trr
[21:43:32] Verified work/wudata_03.xtc
[21:43:32] Verified work/wudata_03.edr
[21:43:33] Completed 1225 out of 500000 steps (0%)
NOTE: Turning on dynamic load balancing
[22:37:10] Completed 5000 out of 500000 steps (1%)
[23:47:25] Completed 10000 out of 500000 steps (2%)
[00:57:51] Completed 15000 out of 500000 steps (3%)
[02:08:12] Completed 20000 out of 500000 steps (4%)
[03:18:45] Completed 25000 out of 500000 steps (5%)
[04:29:14] Completed 30000 out of 500000 steps (6%)
[05:39:24] Completed 35000 out of 500000 steps (7%)
[06:49:46] Completed 40000 out of 500000 steps (8%)
[08:00:17] Completed 45000 out of 500000 steps (9%)
[09:10:47] Completed 50000 out of 500000 steps (10%)
[10:21:10] Completed 55000 out of 500000 steps (11%)
[11:31:51] Completed 60000 out of 500000 steps (12%)
[12:42:11] Completed 65000 out of 500000 steps (13%)
[13:52:36] Completed 70000 out of 500000 steps (14%)
[15:02:53] Completed 75000 out of 500000 steps (15%)
pause
stop
help
^C
Folding@Home Client Shutdown.
marco@Marco-Server:~/folding$
Received the INT signal, stopping at the next NS step
./fah6 -verbosity 9
Note: Please read the license agreement (fah6 -license). Further
use of this software requires that you have read and accepted this agreement.
32 cores detected
--- Opening Log file [February 7 16:15:10 UTC]
# Linux SMP Console Edition ###################################################
###############################################################################
Folding@Home Client Version 6.34
http://folding.stanford.edu
###############################################################################
###############################################################################
Launch directory: /home/marco/folding
Executable: ./fah6
Arguments: -verbosity 9 -smp -bigbeta
[16:15:10] - Ask before connecting: No
[16:15:10] - User name: Schmidde (Team 70335)
[16:15:10] - User ID: 3414AED219C9F399
[16:15:10] - Machine ID: 1
[16:15:10]
[16:15:11] Loaded queue successfully.
[16:15:11]
[16:15:11] + Processing work unit
[16:15:11] Core required: FahCore_a5.exe
[16:15:11] - Autosending finished units... [16:15:11]
[16:15:11] Trying to send all finished work units
[16:15:11] + No unsent completed units remaining.
[16:15:11] - Autosend completed
[16:15:11] Core found.
[16:15:11] Working on queue slot 03 [February 7 16:15:11 UTC]
[16:15:11] + Working ...
[16:15:11] - Calling './FahCore_a5.exe -dir work/ -nice 19 -suffix 03 -np 32 -checkpoint 3 -verbose -lifeline 4182 -version 634'
[16:15:11]
[16:15:11] *------------------------------*
[16:15:11] Folding@Home Gromacs SMP Core
[16:15:11] Version 2.27 (Thu Feb 10 09:46:40 PST 2011)
[16:15:11]
[16:15:11] Preparing to commence simulation
[16:15:11] - Looking at optimizations...
[16:15:11] - Files status OK
[16:15:17] - Expanded 57246854 -> 71846524 (decompressed 50.4 percent)
[16:15:17] Called DecompressByteArray: compressed_data_size=57246854 data_size=71846524, decompressed_data_size=71846524 diff=0
[16:15:18] - Digital signature verified
[16:15:18]
[16:15:18] Project: 6903 (Run 5, Clone 13, Gen 69)
[16:15:18]
[16:15:18] Assembly optimizations on if available.
[16:15:18] Entering M.D.
[16:15:24] Using Gromacs checkpoints
:-) G R O M A C S (-:
Groningen Machine for Chemical Simulation
:-) VERSION 4.5.3 (-:
Written by Emile Apol, Rossen Apostolov, Herman J.C. Berendsen,
Aldert van Buuren, Pär Bjelkmar, Rudi van Drunen, Anton Feenstra,
Gerrit Groenhof, Peter Kasson, Per Larsson, Pieter Meulenhoff,
Teemu Murtola, Szilard Pall, Sander Pronk, Roland Schulz,
Michael Shirts, Alfons Sijbers, Peter Tieleman,
Berk Hess, David van der Spoel, and Erik Lindahl.
Copyright (c) 1991-2000, University of Groningen, The Netherlands.
Copyright (c) 2001-2010, The GROMACS development team at
Uppsala University & The Royal Institute of Technology, Sweden.
check out http://www.gromacs.org for more information.
:-) Gromacs (-:
[16:15:29] Mapping NT from 32 to 32
Reading file work/wudata_03.tpr, VERSION 4.5.4-dev-20110530-cc815 (single precision)
Starting 32 threads
Reading checkpoint file work/wudata_03.cpt generated: Tue Feb 7 17:09:34 2012
Making 2D domain decomposition 8 x 4 x 1
starting mdrun 'Overlay'
17500000 steps, 70000.0 ps (continuing from step 17079630, 68318.5 ps).
[16:15:42] Resuming from checkpoint
[16:16:15] Verified work/wudata_03.log
[16:16:16] Verified work/wudata_03.trr
[16:16:16] Verified work/wudata_03.xtc
[16:16:16] Verified work/wudata_03.edr
[16:16:18] Completed 79630 out of 500000 steps (15%)
NOTE: Turning on dynamic load balancing
[16:22:53] Completed 80000 out of 500000 steps (16%)
[17:34:19] Completed 85000 out of 500000 steps (17%)